Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVRRIRAAALPDLPDASWSNALLVGEELVMSG-MTAHPATRQAAERGAALDAHAQALVVLGKVKALLEAAGGHVGNLYKLNVYVTRIADKDAIGRARQEFFAGQGT--FPASTLVEVSGLVFPELLVEIDAWARLDIDLANCDEA
3VCZ Chain:B ((47-150))
-------------------------LGNMVLTSGQIPVNPATGEVPA-----DIAAQARQSLDNVKAVVEASGLTVGDIVKMTVFVKDLNDFGTVNEVYGNFFDEHNVAHYPARSCVEVARLP-KDVGIEIEAIA------------
General information:
TITO was launched using:
RESULT:
Template:
3VCZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57455 for 725 contacts (-79.2/contact) +
2D Compatibility (PS) -11069 + (NN) -4270 + (LL) 3432
1D Compatibility (HY) -8800 + (ID) 1750
Total energy: -79912.0 ( -110.22 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_3VCZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VCZ-query.scw
PDB file :
Tito_Scwrl_3VCZ.pdb
: