Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLPAAPKVPPQVAEQAVRWLVELQGGADDERLRQAWQRWRQAAPEHEQAWRHIEAVNQRLAGIGTPLALAAINAPHSPQRRRALKTLLLVLAAGGSAWGLRESGSLQRWSADYATGVGERRRLALADGSRLELNSDTAVDVRFDAGERRLLLLRGEIQLSTGHDPRPLHVYSAEGRLRPVGTRFDVRQFAGRTRVAVHEGAVQVENRAGQGLLLPSGRQLDFDRERLGAPQPLPVGSGAWTDG--MLVAAGMRLDEFLAEVARYRPGRLGCDPRIGGLRISGSYPLDDSERILATLPAVLPVEVRRVTRYWVGVHPRE |
| 3GR5 Chain:A ((6-84)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLEKRLGKNEYFIITKSSPVRAILNDFAANYSIPVFISSSVN-DDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51349 for 500 contacts (-102.7/contact) +
2D Compatibility (PS) -8254 + (NN) -4569 + (LL) 15588
1D Compatibility (HY) -7200 + (ID) 300
Total energy: -56084.0 ( -112.17 by residue)
QMean score : 0.265
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