Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVRLSLPAPAKLNLFLHILGRRDDGYHELQTLFQ---FLDHGDELHFEARQDGQVRLHTEIAGVPHDSNLIVRAARGLQEASG------SPQGVDIWLDKRLPMGGGIGGGSSDAATTLLALNHLWQLGWDEDRIAALGLRLGADVPVFTRGRAAFAEGVGEKLTPVDIPEPWYLVVVPQVLVSTAEIFSDPLLTRDSPAIKVRTVLEGDSRNDCQPVVERRYPEVRNALILLNKFV-SARLTGTGGCVFGSFPNKAEADKVSALLPDHLQRFVAKGSNISMLHRKLETLV |
| 2WW4 Chain:A ((1-281)) | --MRTQWPSPAKLNLFLYITGQRADGYH---TLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLE-YAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLHRA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161804 for 2307 contacts (-70.1/contact) +
2D Compatibility (PS) -28719 + (NN) -6245 + (LL) 1412
1D Compatibility (HY) -23600 + (ID) 7500
Total energy: -226456.0 ( -98.16 by residue)
QMean score : 0.497
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