Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQMPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
1FYR Chain:C ((8-105))
------------------------------------------------------MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIE-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1FYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25606 for 503 contacts (-50.9/contact) +
2D Compatibility (PS) -10676 + (NN) -7025 + (LL) 5928
1D Compatibility (HY) -13600 + (ID) 4900
Total energy: -55879.0 ( -111.09 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_1FYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FYR-query.scw
PDB file :
Tito_Scwrl_1FYR.pdb
: