Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKATSL
3OZG Chain:B ((20-247))
MPIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKA---
General information:
TITO was launched using:
RESULT:
Template:
3OZG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -204283 for 1843 contacts (-110.8/contact) +
2D Compatibility (PS) -24512 + (NN) -11879 + (LL) 200
1D Compatibility (HY) -37200 + (ID) 11400
Total energy: -289074.0 ( -156.85 by residue)
QMean score : 0.791
(partial model without unconserved sides chains):
PDB file :
Tito_3OZG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OZG-query.scw
PDB file :
Tito_Scwrl_3OZG.pdb
: