Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
1DDS Chain:B ((1-159))
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
General information:
TITO was launched using:
RESULT:
Template:
1DDS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124172 for 1172 contacts (-105.9/contact) +
2D Compatibility (PS) -17432 + (NN) -10135 + (LL) 0
1D Compatibility (HY) -22400 + (ID) 7950
Total energy: -182089.0 ( -155.37 by residue)
QMean score : 0.765
(partial model without unconserved sides chains):
PDB file :
Tito_1DDS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DDS-query.scw
PDB file :
Tito_Scwrl_1DDS.pdb
: