Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND
4M6K Chain:A ((2-187))
-VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND
General information:
TITO was launched using:
RESULT:
Template:
4M6K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110546 for 1414 contacts (-78.2/contact) +
2D Compatibility (PS) -20044 + (NN) -9729 + (LL) 208
1D Compatibility (HY) -26800 + (ID) 9300
Total energy: -176211.0 ( -124.62 by residue)
QMean score : 0.815
(partial model without unconserved sides chains):
PDB file :
Tito_4M6K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M6K-query.scw
PDB file :
Tito_Scwrl_4M6K.pdb
: