Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
4GAL Chain:B ((1-135))
-SNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
General information:
TITO was launched using:
RESULT:
Template:
4GAL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77942 for 990 contacts (-78.7/contact) +
2D Compatibility (PS) -14391 + (NN) -5891 + (LL) 208
1D Compatibility (HY) -17200 + (ID) 6750
Total energy: -121966.0 ( -123.20 by residue)
QMean score : 0.696
(partial model without unconserved sides chains):
PDB file :
Tito_4GAL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GAL-query.scw
PDB file :
Tito_Scwrl_4GAL.pdb
: