Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
3ZK6 Chain:A ((6-161))
-SQSNRELVVDFLSYKLSQKGYSWSQFS----------------------------------------------------IPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGN------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZK6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106221 for 1064 contacts (-99.8/contact) +
2D Compatibility (PS) -15204 + (NN) -3062 + (LL) 4548
1D Compatibility (HY) -22000 + (ID) 7200
Total energy: -149139.0 ( -140.17 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_3ZK6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZK6-query.scw
PDB file :
Tito_Scwrl_3ZK6.pdb
: