Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSVREPQ
1OH0 Chain:A ((3-127))
--LPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSV----
General information:
TITO was launched using:
RESULT:
Template:
1OH0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81173 for 925 contacts (-87.8/contact) +
2D Compatibility (PS) -14092 + (NN) -6034 + (LL) 312
1D Compatibility (HY) -18400 + (ID) 6250
Total energy: -125637.0 ( -135.82 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_1OH0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OH0-query.scw
PDB file :
Tito_Scwrl_1OH0.pdb
: