Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELAVGNLSEGNASWPEPPAPEPGPLFGIGVENFVTLVVFGLIFALGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGCIWALSIAMASPVAYHQGLFHPRASNQTFCWEQWPDPR--HKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNM-SKKSEASKKKTAQTVLVVVVVFGISWLPHHI-IHLWAEFGV---FPLTPASFLFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCHIRKDSHLSDTKESKSRIDTPPSTNCTHV |
| 4RWD Chain:B ((128-405)) | --------------------------------------LYSAVCAVGLLGNVLVMFGIVRYT--KMKTATNIYIFNLALAD-ALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMV-MAVTRPR-DGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIA---LGYANSSLNPVLYAFLDENFKRCFRQL-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224836 for 2082 contacts (-108.0/contact) +
2D Compatibility (PS) -27536 + (NN) -5960 + (LL) 2800
1D Compatibility (HY) -30000 + (ID) 4850
Total energy: -290382.0 ( -139.47 by residue)
QMean score : 0.254
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