Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPLCLNCSVLPGDLYPGGARNPMACNGSAARGHFDPEDLNLTDEALRLKYLGPQQTELFMPICATYLLIFVVGAVGNGLTCLVILRHKAMRT---PTNYYLFSLAVSDLLVLLVGLPLELYE-MWHNYPFLLGVGGCYFRTLLFEMVCLASVLNVTALSVERYVAVVHPLQARSMVTRAHVRRVLGAVWGLAMLCSLPNTSLHGIRQLHVPCRGPVPDSAVCMLVRPRALYNMVVQTTALLFFCLPMAIMSVLYLLIGLRLRRERLLLMQEAKGRGSAAARSRYTCRLQQHDRGRRQVTKMLFVLVVVFGICWAPFHADRVMWSVVS--QWTDGLHLAFQHVHVISGIFFYLGSAANPVLYSLMSSRFRETFQEAL-CLGACCHRLRPRHSSHSLSRMTTGSTLCDVGSLGSWVHPLAGNDGPEAQQETDPS |
| 4BV0 Chain:B ((22-326)) | --------------------------------------------------------------VTAIYLALFVVGTVGNGVTLFTLAR------LQSRVDYYLGSLALSDLLILLFALPVDVYNFIWVHHPWAFGDAGCKGYYFLREACTYATALNVVSLSVELYLAIRHPFKHKT-MSRSRTKKFISAIWLASALLAIPMLFTVGLQNL--SGDGTHPGGLVCTPIVDTATLKVVIQLNTFMSFLFPMLVASILNTVIARRLT----VMV-----------------RVQALRRG----VLVLRAMVIAFVVCWLPYHVRRLMFVYISDEQWTTALFDFYHYFYMLSNALVYVSAAINPILYNLVSANFRQVFLSTLACLCP--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280318 for 2105 contacts (-133.2/contact) +
2D Compatibility (PS) -28093 + (NN) -8694 + (LL) 6852
1D Compatibility (HY) -31200 + (ID) 5100
Total energy: -346553.0 ( -164.63 by residue)
QMean score : 0.255
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