Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQAAGHPEPLDSRGSFSLPTMGANVSQDNGTGHNATFSEPLPFLYVLLPAVYSGICAVGLTGNTAVILVILRAPKMKTVTNVFILNLAVADGLFTLVLPVNIAEHLLQYWPFGELLCKLVLAVDHYNIFSSIYFLAVMSVDRYLVVLATVRSRHMPWRTYRGAKVASLCVWLGVTVLVLPFFSFAGVYSNELQVPSCGLSFPWPEQVWFKASRVYTLVLGFVLPVCTICVLYTDLLRRLRAVRLRSGAKALGKARRKVTVLVLVVLAVCLLCWTPFHLASVVALTTDLP-QTPLVISMSYVITSLSYANSCLNPFLYAFLDDNFRKNFRSILRC |
4RWA Chain:B ((121-403)) | -------------------------------------------LAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKA--LDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAV-VCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLR--------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252827 for 2100 contacts (-120.4/contact) +
2D Compatibility (PS) -27348 + (NN) -8599 + (LL) 2280
1D Compatibility (HY) -34400 + (ID) 5800
Total energy: -326694.0 ( -155.57 by residue)
QMean score : 0.263
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