Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLQNQDTMEILSNSTSKFPTFLLTGIPGLESAHVWISIPFCCFYAIALSGNSVILFVIITQQSLHEPMYYFLFRLSATDLGLTVSSLSTTLGILWFEAREISLYSCIVQMFFLHGFTFMESGVLVATAFDRYVAICDPLRYTTILTNSRIIQMGLLMITRAIVLILPLLLLLKPLYFCRMNALSHSYCYHPDVIQLACSDIRANSICGLIDLILTTGIDTPCIVLSYILIIHSVLRIASP-------------------------------------------------------------------------------------------------------------------------------------------------------------------EEWHKVFSTCVSHVGAVAFFYIHMLSLSLVYRYGR----------SAPRVVHSVMANVYLLLPPVLNPIIDSVKTKQIRKAMLSLLLTK
3ODU Chain:A ((44-494))----------------------------ANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV-ANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSE-----ADDRYICDRFYPN------DLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSG


General information:
TITO was launched using:
RESULT:

Template: 3ODU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -226489 for 2006 contacts (-112.9/contact) +
2D Compatibility (PS) -26919 + (NN) 9702 + (LL) 2596
1D Compatibility (HY) -12400 + (ID) 1800
Total energy: -255310.0 ( -127.27 by residue)
QMean score : 0.155

(partial model without unconserved sides chains):
PDB file : Tito_3ODU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ODU-query.scw
PDB file : Tito_Scwrl_3ODU.pdb: