Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQAALTAFFVLLFSLLSLLGIAANGFIVLVLGREWLRYGRLLPLDMILISLGASRFCLQLVG-TVHNFYYSAQKVEYSGGLGRQFFHLHWHFLNSATFWFCSWLSVLFCVKIANITHSTFLWLKWRFPGWVPWLLLGSVLISFIITLLFFWVNYPVYQEFLIRKFSGNMTYKW-NT-R---IETYYFPSLKLVIWSIPFSVFLVSIMLLINSLRRHTQRMQHNGH-------SLQDPSTQAHTRALKSLISFLILYALSFLSLIID-AAKFI----SMQNDFYWPWQIAVYLCISVHPFILIFSNLKLRSVFSQLLLLARGFWVA |
2Z73 Chain:A ((34-333)) | -----YYSLGIFIGICGIIGCGGNGIVIYLFTKTK---SLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG---RPMAA-SKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGA-------YTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249336 for 2271 contacts (-109.8/contact) +
2D Compatibility (PS) -28412 + (NN) -2599 + (LL) 2512
1D Compatibility (HY) -12000 + (ID) 1800
Total energy: -291635.0 ( -128.42 by residue)
QMean score : 0.290
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