Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALTPESPSSFPGLAATGSSVPEPPGGPNATLNSSWASPTEPSSLEDLVATGTIGTLLSAMGVVGVVGNAYTLVVTCRSLRAVASMYVYVVNLALADLLYLLSIPFIVATYVTKEWHFGDVGCRVLFGLDFLTMHASIFTLTVMSSERYAAVLRPLDTVQ-RPKGYRKLLALGTWLLALLLTLPVMLAMRLVR-RGPKSLCL-----PAWGPRAHRAYLTLLFATSIAGPGLLIGLLYARLARAYRRSQRAS-FKRARRPGARALRLVLGIVLLFWACFLPFWL----WQLLAQYHQAPLAPRTARIVNYLTTC--LTYGNSCANPFLYTLLTRNYRDHLRGRVRGPGSGGGRGPVPSLQPRARFQRCSGRSLSSCSPQPTDSLVLAPAAPARPAPEGPRAPA |
| 4RWA Chain:B ((125-403)) | -----------------------------------------------------ITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMV-MAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVV--PILIITVCYGLMLLR--------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPL------VVAALHLCIALGYANSSLNPVLYAFLDENFKRCFR-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210685 for 1909 contacts (-110.4/contact) +
2D Compatibility (PS) -25947 + (NN) -3782 + (LL) 2396
1D Compatibility (HY) -29600 + (ID) 4450
Total energy: -272068.0 ( -142.52 by residue)
QMean score : 0.337
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