Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEI--------HFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQ--NFSRCLELQCQPDSSTLPPPWSPRPLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH |
4EUK Chain:B ((6-78)) | ----------------------------------------------------------------------------------------MDLVQKQKSLQDYTKSLFLEGILDSQFLQLQQLQDE-SNPDFVSQVVTLFFQDSDRILNDLSLSLDQQVVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQEYYLVKNRLETLFKLEQQIVASGGMIPAVEL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4555 for 255 contacts (-17.9/contact) +
2D Compatibility (PS) -6560 + (NN) -3718 + (LL) 7076
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -11957.0 ( -46.89 by residue)
QMean score : 0.302
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