Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTG----VNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTL-SIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV---- |
1BYG Chain:A ((15-276)) | -------------------------GWALNMKELKLLQTIGKGEFGDVMLGDYRG-------NKVAVKCIK---------NDAQAFLAEASVMTQLRHSNLVQLLGVIV--EEGLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG-NNFVHRDLAARNVLVSED-NVAKVSDFG------------------LLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KDVVPRVEKGY-----------------KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96157 for 1870 contacts (-51.4/contact) +
2D Compatibility (PS) -26343 + (NN) -19232 + (LL) 3264
1D Compatibility (HY) -19600 + (ID) 2900
Total energy: -160968.0 ( -86.08 by residue)
QMean score : 0.441
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