Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVTSALSPCISYARGNGANPTAACCSGVRSLAGAARSTADKQAACKCI--KSA--AGGLNAGKAAGIPSKCGVSVPYAISANVDCSKIR
1L6H Chain:A ((6-66))
--------GQLTVCTGAIAGGA-RPTAACCSSLRA-----------QQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP-------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16812 for 369 contacts (-45.6/contact) +
2D Compatibility (PS) -6081 + (NN) -2692 + (LL) 2392
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -27043.0 ( -73.29 by residue)
QMean score : 0.237
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: