Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEAEAAAEVSCGDAVSALIPCGSFLVGAVAGAPSESCCRGAQGLRRMAGTPGARRALCRCLEQSGPSF-GVLPDRARQLPALCKLGISIPVSPHTDCDKIQ
1AFH Chain:A ((1-93))
-------AISCGQVASAIAPCISYARGQ-GSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61503 for 757 contacts (-81.2/contact) +
2D Compatibility (PS) -9726 + (NN) -1593 + (LL) 1120
1D Compatibility (HY) -5200 + (ID) 1600
Total energy: -78502.0 ( -103.70 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: