Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALTCSTVYNELMPCLGYVQSGGA-VPRACCSGIKTLVSRARATPDRRAACACLKTVAAAAAGGPYLGRAAGLPGRCGVQPPFKIDPNVNCNAV
1AFH Chain:A ((1-92))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS-GLNAGNAASIPSKCGVSIPYTISTSTDCSRV
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70936 for 749 contacts (-94.7/contact) +
2D Compatibility (PS) -9364 + (NN) -1925 + (LL) -172
1D Compatibility (HY) -4800 + (ID) 1900
Total energy: -89097.0 ( -118.95 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: