Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTPCEEATNLLTPCLRYLWAPPEAKPSPECCSGLDKVNKGVKTYDDRHDMCICLSSEAAI-TSADQYKFDNLPKLCNVALFAPVGPKFDCSTIKV
1BWO Chain:A ((1-90))
-IDCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33530 for 608 contacts (-55.1/contact) +
2D Compatibility (PS) -9058 + (NN) -2071 + (LL) 396
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -50263.0 ( -82.67 by residue)
QMean score : 0.199
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: