Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR
1T12 Chain:A ((2-91))
-ITCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS-GINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59134 for 679 contacts (-87.1/contact) +
2D Compatibility (PS) -9157 + (NN) 106 + (LL) -104
1D Compatibility (HY) -9200 + (ID) 2550
Total energy: -80039.0 ( -117.88 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: