Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGAVTGSLGQCYNYLTR---G-G----F--------------IPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGS--RL-------NAGRAARLPGACRVRISYPISARTNCNTVR
1PSY Chain:A ((25-122))
--------KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV--RCMRQT--------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33253 for 506 contacts (-65.7/contact) +
2D Compatibility (PS) -6472 + (NN) 954 + (LL) 1804
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -42167.0 ( -83.33 by residue)
QMean score : 0.265
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: