Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------ACQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCGLAVPHC
1Q1V Chain:A ((309-378))
DEPLIKKLKKPPTDEELKETIKKLLASAN-----LEEVTMKQICKKVYENYPTYDLTERKDFIKTTVKEL-ISLEH-
General information:
TITO was launched using:
RESULT:
Template:
1Q1V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19686 for 386 contacts (-51.0/contact) +
2D Compatibility (PS) -6434 + (NN) -1000 + (LL) -296
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -30016.0 ( -77.76 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_1Q1V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q1V-query.scw
PDB file :
Tito_Scwrl_1Q1V.pdb
: