Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------ACQASQL-AVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLTS-----------CGLAVPHC----
1CWV Chain:A ((393-492))
NRWIYDGGRSLVSSLEASRQCQGSDMSAVLESSRATNGTRAPD--GTLWGEWGSLTAYSSDWQSGEYWVKKTSTDFETMNMDTGALQPGPAYLAFPLCALSI
General information:
TITO was launched using:
RESULT:
Template:
1CWV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18819 for 366 contacts (-51.4/contact) +
2D Compatibility (PS) -6749 + (NN) -2200 + (LL) 112
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -30556.0 ( -83.49 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1CWV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CWV-query.scw
PDB file :
Tito_Scwrl_1CWV.pdb
: