Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATTACVPTQLTPCAPAI--VGNAAPTAACCARLKA----HPASCFCQYKKNPNMQRYVNSPNG-KKVFAACKVPLPKC
1HYP Chain:A ((7-73))
---SCP--DLSICLNILGGSLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPS-
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26694 for 369 contacts (-72.3/contact) +
2D Compatibility (PS) -5919 + (NN) -2214 + (LL) 92
1D Compatibility (HY) -4800 + (ID) 550
Total energy: -40085.0 ( -108.63 by residue)
QMean score : 0.380
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: