Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPLGTCGAQL--SQLAPCARYSVPPLP-G----QALPTPG-------PECCSALGSV--SRDCACGAID---------------------IINSLPAKCGLPRVS-CQ
1W2Q Chain:A ((13-118))
---SSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCD
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32990 for 359 contacts (-91.9/contact) +
2D Compatibility (PS) -6925 + (NN) -1405 + (LL) -160
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -48280.0 ( -134.48 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: