Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPGGCVPQLNRLLACRAYLVPGAADPSADCCSALSSISRDCACSTMG-----------------------IINSIPSRCNIGR-VNCSA
2DS2 Chain:B ((8-68))
----------------------------RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGACP-
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24694 for 197 contacts (-125.4/contact) +
2D Compatibility (PS) -3740 + (NN) -1313 + (LL) 1052
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -32445.0 ( -164.70 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: