Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QGGGGGECVPQL--NRLLACRAYAV----PG--AGDP----S-------AECCSALSSI--SQGCACSAIS---------------------IMNSLPSRCHLSQIN-CSA
1W2Q Chain:A ((13-118))
----SSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCD-
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39973 for 329 contacts (-121.5/contact) +
2D Compatibility (PS) -6904 + (NN) -4878 + (LL) -252
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -57757.0 ( -175.55 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: