Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDLCGMTQAELNECLPAVS----KNNPT-------SPSLLCCNALKHADYTCLCGYKNSPWLGSF-G----VDPKLASSLPKECDLTNAPTC
1S6D Chain:A ((19-101))
--------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMS-QPC
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20974 for 432 contacts (-48.6/contact) +
2D Compatibility (PS) -6747 + (NN) -456 + (LL) 712
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -32765.0 ( -75.84 by residue)
QMean score : 0.212
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: