Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRNPPDREAI---KLAPCAMAAQDTSA------------KVSAICCARVKQMGQNPKCLCAVMLSSTARSS-G----AKPEISMTIPKRCNIANRPVGYKCGAYTLP
1S6D Chain:A ((10-97))
-------GCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL--DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM--------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24705 for 474 contacts (-52.1/contact) +
2D Compatibility (PS) -7053 + (NN) -1601 + (LL) 192
1D Compatibility (HY) -5200 + (ID) 600
Total energy: -38967.0 ( -82.21 by residue)
QMean score : 0.069
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: