Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EDCTVDLK--GLIRECKQYVMFP----ASPKIT------PSSACCSVVQKVNSPCLCSKVTKEIEKVV-------------CMDKVVYVADYYKNPLKPGSDCGSYHVPSQRR
2LVF Chain:A ((7-101))
-ECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLS-----------------
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32625 for 426 contacts (-76.6/contact) +
2D Compatibility (PS) -6986 + (NN) -1453 + (LL) 264
1D Compatibility (HY) -4400 + (ID) 450
Total energy: -45650.0 ( -107.16 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: