Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
HPCGRTFLSALIQLVPCRPSVA----P-FSTLPPNGLCCAAIKTLGQPCLCVLAKG--------PPIVGVD---------RTLALHLPGKCSANFLPCN
1HSS Chain:A ((12-103))
--------FQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPI----
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35430 for 364 contacts (-97.3/contact) +
2D Compatibility (PS) -6225 + (NN) -2171 + (LL) 344
1D Compatibility (HY) -800 + (ID) 500
Total energy: -44782.0 ( -123.03 by residue)
QMean score : 0.112
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: