Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNICPRVNRIVTPCVAYGL----GRAP-------IAPCCRALNDLRFVNTRNLRRAACRCLVGVVNRNP---G---------LR--------RNPRFQNIPRDCRNTFVRPFWWRPRIQCGRIN
1B1U Chain:A ((15-107))
--------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI-------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLAT----------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32100 for 373 contacts (-86.1/contact) +
2D Compatibility (PS) -6045 + (NN) -1532 + (LL) 1876
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -39651.0 ( -106.30 by residue)
QMean score : 0.207
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: