Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCGTVSGYVAPCIGYLTQ----NGP------LPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFP-------T---LN----------AARAAGL--PKACGVNIPYKISKSTNCNSVR
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54105 for 396 contacts (-136.6/contact) +
2D Compatibility (PS) -6466 + (NN) -453 + (LL) 1228
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -64196.0 ( -162.11 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: