Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCGQVTNSLAPCINYLRGSGAGAVPPGCCSGIKSLNSAAQTTPDRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNRFV
1AFH Chain:A ((1-92))
AISCGQVASAIAPCISYARGQ-GSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV-
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76228 for 756 contacts (-100.8/contact) +
2D Compatibility (PS) -9233 + (NN) 666 + (LL) 20
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -95475.0 ( -126.29 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: