Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APPSCQTVTTQLAPCLSYIQNRVKGGGNPSVPCCTGINNIYELAKTKEDRVAICNCLKNAFIHAGNVNPTLVAELPKKCGISFNMPPIDKNYDCNTISMY
1BWO Chain:A ((1-90))
--IDCGHVDSLVRPCLSYVQG----GPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPY-TISLNIDCSRV---
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51603 for 622 contacts (-83.0/contact) +
2D Compatibility (PS) -9237 + (NN) -1223 + (LL) 320
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -69393.0 ( -111.56 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: