Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGQVSSALSPCIPYARGNGANPSAACCSGVRRIAGAVQSTADKKTACNCI--KR--AAGGLNAGKAADIPSKCSVSIPYAINPSVDCSTIR
1L6H Chain:A ((6-66))
--------GQLTVCTGAIAGGA-RPTAACCSSLRA-----------QQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP-------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13090 for 374 contacts (-35.0/contact) +
2D Compatibility (PS) -6075 + (NN) -4320 + (LL) 2192
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -24993.0 ( -66.83 by residue)
QMean score : 0.168
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: