Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSTICKMPVAGLMSCKPSVTPP----NPT-------APSADCCSALSHADLNCLCSYKNSNLLPSL-G----IDPKLAMQLPGKCKLPHPANC
1S6D Chain:A ((19-101))
---------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM-SQPC
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22747 for 437 contacts (-52.1/contact) +
2D Compatibility (PS) -6858 + (NN) -2467 + (LL) 772
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -36050.0 ( -82.49 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: