Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SVDCTTLVLSMADCLSFVSNDSTSKKP-------EGTCCSGLKTVLGTDAECLCEAFKSS--A---QFG---------VV---L----NVTKALALPSACKIKAPPASNCG
1B1U Chain:A ((16-109))
---------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH-----
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35210 for 408 contacts (-86.3/contact) +
2D Compatibility (PS) -6438 + (NN) -1721 + (LL) 768
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -47351.0 ( -116.06 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: