Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QVTLCGMTKEGFASCKPSVQTGVN---PL-------PPSYSCCSALEKADLSCLCFFKKNYPKMLTDN--N----IDPNLAMQLPAKCNMAGSFSCK
1S6D Chain:A ((20-102))
----------MLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMM---LNEPMWIRMRDQVMSMAHNLPIECNLM-SQPCQ
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34369 for 432 contacts (-79.6/contact) +
2D Compatibility (PS) -6748 + (NN) 771 + (LL) 812
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -44684.0 ( -103.44 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: