Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ENPCRLTNEGIEACRPSVT----G-QNPAAPSDACCAALSKADLQCLCFYKNNYPWL----LSSYK---------IDPNLAMQLPVKCKLVGESFHC
1HSS Chain:A ((12-104))
-----FQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIV----
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28890 for 423 contacts (-68.3/contact) +
2D Compatibility (PS) -6675 + (NN) 464 + (LL) 344
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -36757.0 ( -86.90 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: