Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGLSPSQCKQEQT--LGVNACRDILLGK-----A---------PSPACCGRVRVSHVECICPAITPKLASLI-------NVKQAIKLLQDCGRKVPRHFKCGSLNFP
1S6D Chain:A ((7-97))
---TESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM-------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24653 for 475 contacts (-51.9/contact) +
2D Compatibility (PS) -6913 + (NN) -472 + (LL) 484
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -37204.0 ( -78.32 by residue)
QMean score : 0.236
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: