Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSICNVPISGLMACKPAVT----PP-NPSAPTSACCSALTHADMRCLCSYKNSNLLP-----SLG---------IDPNLALQLPPKCNLPRPNC
1HSS Chain:A ((12-103))
-----FQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH---GAFPRCRREVVKLTAASITAVCRLPI---
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23256 for 418 contacts (-55.6/contact) +
2D Compatibility (PS) -6603 + (NN) -3084 + (LL) 84
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -36959.0 ( -88.42 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: