Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EMAHGVCNLSSAGIRACQPAAAIRNP----T-D-----QPSSECCAALAGADLACLCRYKNAAGVWVRFY--R----IDINRAMGLPGKCGLAMPANC
1S6D Chain:A ((20-101))
------------MLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMM---LNEPMWIRMRDQVMSMAHNLPIECNLM-SQPC
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28369 for 428 contacts (-66.3/contact) +
2D Compatibility (PS) -6681 + (NN) 935 + (LL) 1144
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -36421.0 ( -85.10 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: