Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCSDVIKDLRPCVNYLTSGTGKPPSACCAGASALQSAASSTADKKAACECIKSASKSL-NPNPQLAQALPANCGINLPYTISPSVDCSK
1T12 Chain:A ((1-89))
AITCGQVTSNLAPCLAYLRNT-G-PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49844 for 661 contacts (-75.4/contact) +
2D Compatibility (PS) -9461 + (NN) -6303 + (LL) 116
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -75192.0 ( -113.75 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: