Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPQQSCTASL--TGLNVCAPFLVPG------SPTA----S-------TECCNAVQSI--NHDCMCNTMR---------------------IAAQIPAQCNLPPLS-CSAN
1W2Q Chain:A ((14-119))
---SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDL-
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38057 for 339 contacts (-112.3/contact) +
2D Compatibility (PS) -6618 + (NN) -2876 + (LL) 20
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -53881.0 ( -158.94 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: