Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCTSQL--NNLNVCAPFVVP----GAANTNP----N-------AECCNALEAV--QHDCLCSTLQ---------------------ISSRLPSQCNLPPLT-CGN
1W2Q Chain:A ((15-118))
-SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCD-
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32980 for 336 contacts (-98.2/contact) +
2D Compatibility (PS) -6573 + (NN) -2740 + (LL) 40
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -48753.0 ( -145.10 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: