Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRASADRVA--LRMAPCISAADDPQST-----------------PTSSCCSAVHTIGQSPSCLCAVMLSGTA------RAAG---IKPEVAITIPKRCNMADRPVGYKCGDYTLP
1W2Q Chain:A ((16-112))
--------CERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42934 for 436 contacts (-98.5/contact) +
2D Compatibility (PS) -6788 + (NN) 1784 + (LL) 224
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -51814.0 ( -118.84 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: